Plotting a Neighborhood Network with ggplot2
Image credit:
Ian Buller
Here is an example of plotting a neighborhoods network with ggplot2 using the sf and sfdep packages for counties in a U.S. state.
We can display the “weights” feature of the neighborhoods network as the size of the line segments by scaling the size aesthetic with + scale_size_identity().
# Packages
loadedPackages <- c("ggplot2", "sf", "sfdep", "tigris")
invisible(lapply(loadedPackages, require, character.only = TRUE))
# County geometries of Georgia, U.S.A.
shp_ga <- counties(state = "Georgia", cb = TRUE)
# NAD83/UTM zone 17N geospatial projection
proj_ga <- st_transform(shp_ga, crs = 26917)
# First order contiguity (Queen's case by default)
nb <- st_contiguity(st_geometry(proj_ga))
# Contiguity-based spatial weights matrix
nbw <- st_weights(nb)
# County centroids
centroids <- st_centroid(proj_ga)
# Assign latitude and longitude for centroid connections in a dataframe
da <- data.frame(
from = rep(1:length(nbw), attributes(nbw)$comp$d),
to = unlist(nb),
weight = unlist(nbw)
)
da <- cbind(
da,
st_coordinates(centroids)[da$from, 1:2],
st_coordinates(centroids)[da$to, 1:2]
)
colnames(da)[4:7] <- c("longitude", "latitude", "long_to", "lat_to")
Plot counties and first order contiguity line segments with size scaled by “weights” feature.
ggplot() +
geom_sf(data = proj_ga, fill = "white", color = "black") +
geom_sf(data = centroids, color = "blue", size = 1) +
geom_segment(
data = da,
aes(
x = longitude,
y = latitude,
xend = long_to,
yend = lat_to,
size = weight
),
color = "red",
alpha = 0.5
) +
scale_size_identity() +
theme_minimal()
This answer was also posted to Stack Overflow. Some code modified from code by @ StupidWolf’s answer.